1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
use std::fmt;
use std::error::Error as StdError;
use std::convert;
use std::io;
use std::result;
#[macro_use]
#[allow(unused_macros)]
macro_rules! err {
($($tt:tt)*) => { Err(CgatsError::Other(format!($($tt)*))) }
}
#[derive(Debug, PartialEq, Eq)]
pub enum Error {
CannotCompare,
EmptyFile,
FileError,
FormatDataMismatch,
IncompleteData,
InvalidCommand,
InvalidID,
NoData,
NoDataFormat,
UnknownVendor,
UnknownFormatType,
WriteError,
Other(String)
}
pub type Result<T> = result::Result<T, Error>;
impl fmt::Display for Error {
fn fmt(&self, f: &mut fmt::Formatter) -> fmt::Result {
write!(f, "CgatsError::{:?}: {}", &self, &self.description())
}
}
impl std::error::Error for Error {
fn description(&self) -> &str {
use Error::*;
match &self {
CannotCompare => "Cannot compare data sets!",
EmptyFile => "File is empty!",
FileError => "Problem reading file!",
FormatDataMismatch => "DATA length does not match DATA_FORMAT length!",
IncompleteData => "Not enough data for the calculation!",
InvalidCommand => "Invalid Compare command!",
InvalidID => "SAMPLE_ID is not an integer!",
NoData => "Color Data not found!",
NoDataFormat => "Cannot find BEGIN_DATA_FORMAT tag!",
UnknownVendor => "Cannot determine Vendor!",
UnknownFormatType => "Unknown Data Format Type!",
WriteError => "Problem writing to file!",
Other(message) => &message,
}
}
}
impl convert::From<io::Error> for Error {
fn from(e: io::Error) -> Self {
eprintln!("{}: {:?}",e, e.kind());
Error::FileError
}
}
impl convert::From<Error> for fmt::Error {
fn from(cge: Error) -> Self {
eprintln!("{}", cge);
fmt::Error
}
}